Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Matn4O89029 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Matn4O89029 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Matn4O89029 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn4O89029 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.78□□□□□ -0.52
Matn4O89029 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.77□□□□□ -0.52
Matn4O89029 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.77□□□□□ -0.52
Matn4O89029 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Matn4O89029 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Matn4O89029 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Matn4O89029 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Matn4O89029 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.77□□□□□ -0.52
Matn4O89029 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Matn4O89029 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Matn4O89029 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.77□□□□□ -0.53
Matn4O89029 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.77□□□□□ -0.53
Matn4O89029 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.77□□□□□ -0.53
Matn4O89029 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Matn4O89029 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Matn4O89029 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Matn4O89029 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Matn4O89029 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.76□□□□□ -0.53
Matn4O89029 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.76□□□□□ -0.53
Matn4O89029 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.76□□□□□ -0.53
Matn4O89029 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Matn4O89029 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Matn4O89029 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.76□□□□□ -0.53
Matn4O89029 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Matn4O89029 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms