Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Gm11618-201ENSMUST00000117946 267 ntBASIC13.5□□□□□ -0.25
Ube3aO08759 Gm11918-201ENSMUST00000121660 179 ntBASIC13.5□□□□□ -0.25
Ube3aO08759 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.5□□□□□ -0.25
Ube3aO08759 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.5□□□□□ -0.25
Ube3aO08759 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.5□□□□□ -0.25
Ube3aO08759 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ube3aO08759 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ube3aO08759 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.49□□□□□ -0.25
Ube3aO08759 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ube3aO08759 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ube3aO08759 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.49□□□□□ -0.25
Ube3aO08759 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
Ube3aO08759 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm18187-201ENSMUST00000196476 984 ntBASIC13.49□□□□□ -0.25
Ube3aO08759 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.49□□□□□ -0.25
Ube3aO08759 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.49□□□□□ -0.25
Ube3aO08759 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.49□□□□□ -0.25
Ube3aO08759 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.49□□□□□ -0.25
Ube3aO08759 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ube3aO08759 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ube3aO08759 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.49□□□□□ -0.25
Ube3aO08759 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ube3aO08759 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ube3aO08759 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.48□□□□□ -0.25
Ube3aO08759 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Ube3aO08759 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ube3aO08759 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.48□□□□□ -0.25
Ube3aO08759 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ube3aO08759 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.48□□□□□ -0.25
Ube3aO08759 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ube3aO08759 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ube3aO08759 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ube3aO08759 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ube3aO08759 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ube3aO08759 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms