Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm3336J3QMQ6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 AA914427-201ENSMUST00000193194 1166 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm3336J3QMQ6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm44967-201ENSMUST00000207047 631 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm3336J3QMQ6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3336J3QMQ6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm3336J3QMQ6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms