Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm3139J3QK78 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm3139J3QK78 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.44□□□□□ -0.42
Gm3139J3QK78 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm44967-201ENSMUST00000207047 631 ntBASIC12.44□□□□□ -0.42
Gm3139J3QK78 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm3139J3QK78 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm15808-201ENSMUST00000119046 604 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm9630-201ENSMUST00000178304 885 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 AA914427-201ENSMUST00000193194 1166 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.43□□□□□ -0.42
Gm3139J3QK78 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm3139J3QK78 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm3139J3QK78 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.42□□□□□ -0.42
Gm3139J3QK78 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms