Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm16296-201ENSMUST00000159905 325 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm10774-201ENSMUST00000188689 204 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.04■□□□□ -0
NpcdF8VQB8 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Snora73b-201ENSMUST00000083419 205 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.04■□□□□ -0
NpcdF8VQB8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.04■□□□□ -0
NpcdF8VQB8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.04■□□□□ -0
NpcdF8VQB8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.03■□□□□ -0
NpcdF8VQB8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Gm24891-201ENSMUST00000104391 136 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC15.03■□□□□ -0
NpcdF8VQB8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Mir7076-201ENSMUST00000183519 74 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Gm5733-201ENSMUST00000190232 939 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Mir7686-201ENSMUST00000200604 57 ntBASIC15.03■□□□□ -0
NpcdF8VQB8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.03■□□□□ -0
NpcdF8VQB8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.03■□□□□ -0
NpcdF8VQB8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.03■□□□□ -0
NpcdF8VQB8 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NpcdF8VQB8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NpcdF8VQB8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Gm42518-201ENSMUST00000196277 938 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.02■□□□□ -0
NpcdF8VQB8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.02■□□□□ -0
NpcdF8VQB8 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.02■□□□□ -0
NpcdF8VQB8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NpcdF8VQB8 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC15.02■□□□□ -0
NpcdF8VQB8 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.02□□□□□ -0.01
NpcdF8VQB8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NpcdF8VQB8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms