Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Gm15276-201ENSMUST00000145953 498 ntBASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.43□□□□□ -0.26
Clca3bE9PUL3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clca3bE9PUL3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm24934-201ENSMUST00000103764 111 ntBASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clca3bE9PUL3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm9996-201ENSMUST00000070359 913 ntBASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Clca3bE9PUL3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms