Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm15370-201ENSMUST00000117158 253 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm11793-201ENSMUST00000120433 981 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm37489-201ENSMUST00000191883 159 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.19□□□□□ -0.46
Clip3B9EHT4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clip3B9EHT4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm3890-201ENSMUST00000182416 207 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm29396-201ENSMUST00000185659 716 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm43118-201ENSMUST00000199149 775 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Olfr284-202ENSMUST00000206647 966 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Gm9368-201ENSMUST00000219348 831 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.18□□□□□ -0.46
Clip3B9EHT4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clip3B9EHT4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms