Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sec61a2Q9JLR1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm11637-201ENSMUST00000120601 592 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm1335-201ENSMUST00000121653 386 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 AY702102-202ENSMUST00000194651 1173 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sec61a2Q9JLR1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm23931-201ENSMUST00000103842 109 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm12957-201ENSMUST00000117835 377 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm37042-201ENSMUST00000193816 581 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm43438-201ENSMUST00000198133 379 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.28□□□□□ -0.6
Sec61a2Q9JLR1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sec61a2Q9JLR1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms