Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.45□□□□□ -0.42
Tubb3Q9ERD7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm26185-201ENSMUST00000157692 266 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Tubb3Q9ERD7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm43133-201ENSMUST00000197472 463 ntBASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Snora73a-201ENSMUST00000082453 205 ntBASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Tubb3Q9ERD7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms