Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.02□□□□□ -0.33
Cpne8Q9DC53 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Cpne8Q9DC53 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm14660-201ENSMUST00000119809 575 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm27731-201ENSMUST00000185192 107 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm39404-201ENSMUST00000216350 313 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Snora73a-201ENSMUST00000082453 205 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne8Q9DC53 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm22018-201ENSMUST00000104357 131 ntBASIC13□□□□□ -0.33
Cpne8Q9DC53 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm2639-201ENSMUST00000156881 1297 ntBASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13□□□□□ -0.33
Cpne8Q9DC53 AC125209.1-201ENSMUST00000225812 766 ntBASIC13□□□□□ -0.33
Cpne8Q9DC53 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cpne8Q9DC53 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne8Q9DC53 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cpne8Q9DC53 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms