Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps33aQ9D2N9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Mir449b-201ENSMUST00000104833 80 ntBASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm26308-201ENSMUST00000157768 69 ntBASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps33aQ9D2N9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm27622-201ENSMUST00000183779 60 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm27430-201ENSMUST00000184585 107 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm44333-201ENSMUST00000197168 107 ntBASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps33aQ9D2N9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms