Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm23931-201ENSMUST00000103842 109 ntBASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm9022-201ENSMUST00000182482 992 ntBASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ddx56Q9D0R4 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm27243-201ENSMUST00000183964 521 ntBASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm24136-201ENSMUST00000083374 165 ntBASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ddx56Q9D0R4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx56Q9D0R4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx56Q9D0R4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.15□□□□□ -0.31
Ddx56Q9D0R4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ddx56Q9D0R4 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm22018-201ENSMUST00000104357 131 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm13736-201ENSMUST00000119272 253 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm18062-201ENSMUST00000208020 547 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm18055-201ENSMUST00000208254 547 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx56Q9D0R4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms