Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm5687-201ENSMUST00000118252 640 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm27306-201ENSMUST00000183970 107 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm29667-201ENSMUST00000190817 490 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm44397-201ENSMUST00000195950 113 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Krt88Q9CPR6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Krt88Q9CPR6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Gm6983-201ENSMUST00000214912 628 ntBASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.27□□□□□ -0.61
Krt88Q9CPR6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.26□□□□□ -0.61
Krt88Q9CPR6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms