Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Mir1982-201ENSMUST00000157368 74 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm43818-201ENSMUST00000200605 466 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm7561-201ENSMUST00000211203 886 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp1b1Q99LU0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp1b1Q99LU0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp1b1Q99LU0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms