Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm15806-201ENSMUST00000120696 955 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm9002-201ENSMUST00000178437 499 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm6244-201ENSMUST00000178732 841 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.41□□□□□ -0.58
Lims1Q99JW4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lims1Q99JW4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.4□□□□□ -0.58
Lims1Q99JW4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Mir1894-201ENSMUST00000122802 81 ntBASIC11.4□□□□□ -0.58
Lims1Q99JW4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Gm9022-201ENSMUST00000182482 992 ntBASIC11.4□□□□□ -0.58
Lims1Q99JW4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.4□□□□□ -0.58
Lims1Q99JW4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lims1Q99JW4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.4□□□□□ -0.59
Lims1Q99JW4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Lims1Q99JW4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm27243-201ENSMUST00000183964 521 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.39□□□□□ -0.59
Lims1Q99JW4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms