Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdhr1Q8VHP6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdhr1Q8VHP6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdhr1Q8VHP6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdhr1Q8VHP6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Gm14017-201ENSMUST00000121934 386 ntBASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Gm45186-201ENSMUST00000206874 478 ntBASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdhr1Q8VHP6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm14130-201ENSMUST00000118417 987 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm13665-201ENSMUST00000120830 528 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm14999-201ENSMUST00000121039 624 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm8885-201ENSMUST00000189382 598 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdhr1Q8VHP6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdhr1Q8VHP6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms