Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Rpph1-201ENSMUST00000175096 319 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Q8VDP2 Gm37230-201ENSMUST00000194491 818 ntBASIC12.19□□□□□ -0.46
Q8VDP2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.19□□□□□ -0.46
Q8VDP2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.19□□□□□ -0.46
Q8VDP2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.19□□□□□ -0.46
Q8VDP2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.19□□□□□ -0.46
Q8VDP2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Q8VDP2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 AC154352.1-201ENSMUST00000221477 2365 ntBASIC12.19□□□□□ -0.46
Q8VDP2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Q8VDP2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Q8VDP2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Q8VDP2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm16198-201ENSMUST00000118766 670 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Gm10275-202ENSMUST00000168697 495 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Gm43125-201ENSMUST00000201724 730 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm18057-201ENSMUST00000208220 503 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.18□□□□□ -0.46
Q8VDP2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.18□□□□□ -0.46
Q8VDP2 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Gm10275-201ENSMUST00000092620 635 ntBASIC12.18□□□□□ -0.46
Q8VDP2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.18□□□□□ -0.46
Q8VDP2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Q8VDP2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Gm13126-201ENSMUST00000117079 3063 ntBASIC12.18□□□□□ -0.46
Q8VDP2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Q8VDP2 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Q8VDP2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Q8VDP2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q8VDP2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q8VDP2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Q8VDP2 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms