Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rfwd3Q8CIK8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm12502-201ENSMUST00000120197 444 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm8738-201ENSMUST00000172606 329 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm43630-201ENSMUST00000201550 776 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Rfwd3Q8CIK8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm45880-201ENSMUST00000213041 853 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.78□□□□□ -0.52
Rfwd3Q8CIK8 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms