Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.62□□□□□ -0.39
Clip4Q8CI96 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clip4Q8CI96 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.61□□□□□ -0.39
Clip4Q8CI96 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.61□□□□□ -0.39
Clip4Q8CI96 Gm42693-201ENSMUST00000196779 631 ntBASIC12.61□□□□□ -0.39
Clip4Q8CI96 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.61□□□□□ -0.39
Clip4Q8CI96 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Clip4Q8CI96 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Clip4Q8CI96 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clip4Q8CI96 Gm25927-201ENSMUST00000175058 117 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms