Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm43163-201ENSMUST00000196571 442 ntBASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Gm17936-201ENSMUST00000199413 988 ntBASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 AC169511.1-201ENSMUST00000227639 995 ntBASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Retreg1-206ENSMUST00000228306 1430 ntBASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 AC158636.1-201ENSMUST00000220118 1393 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm23595-201ENSMUST00000104306 130 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm12684-201ENSMUST00000118675 999 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm16030-201ENSMUST00000159098 603 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm5267-201ENSMUST00000191574 1045 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 AC174797.2-201ENSMUST00000225835 165 ntBASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pabpn1Q8CCS6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm38117-201ENSMUST00000194653 939 ntBASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm5449-201ENSMUST00000081132 357 ntBASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pabpn1Q8CCS6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm12470-201ENSMUST00000117239 1049 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm2474-201ENSMUST00000195162 559 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm7183-201ENSMUST00000213870 1005 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gm19046-201ENSMUST00000221263 1298 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 CT025603.1-201ENSMUST00000224040 448 ntBASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpn1Q8CCS6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Pabpn1Q8CCS6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC18.96■□□□□ 0.63
Pabpn1Q8CCS6 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpn1Q8CCS6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpn1Q8CCS6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms