Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Gm44855-201ENSMUST00000205725 362 ntBASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lysmd4Q8CC84 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Lysmd4Q8CC84 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm2495-201ENSMUST00000191160 466 ntBASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm6218-201ENSMUST00000219812 628 ntBASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Lysmd4Q8CC84 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Lysmd4Q8CC84 Gm8805-201ENSMUST00000117848 313 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms