Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm23363-201ENSMUST00000175024 79 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm18968-201ENSMUST00000221319 862 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Mir339-201ENSMUST00000083659 96 ntBASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Chd9Q8BYH8 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm11836-201ENSMUST00000121022 441 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm22846-201ENSMUST00000157706 270 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm18304-201ENSMUST00000189162 546 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm19587-201ENSMUST00000191395 545 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm23604-201ENSMUST00000104311 132 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm11619-201ENSMUST00000117474 237 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm16459-201ENSMUST00000121443 686 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm16296-201ENSMUST00000159905 325 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm7192-201ENSMUST00000210793 1137 ntBASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Chd9Q8BYH8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Chd9Q8BYH8 Gm12623-201ENSMUST00000119849 1983 ntBASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms