Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm29032-201ENSMUST00000189797 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm28695-201ENSMUST00000190300 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm37448-201ENSMUST00000192795 697 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm45598-202ENSMUST00000210719 986 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm18730-201ENSMUST00000218038 343 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rd3Q8BRE0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.27□□□□□ -0.29
Rd3Q8BRE0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm12314-201ENSMUST00000118104 538 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm27552-201ENSMUST00000183351 62 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm27844-201ENSMUST00000183613 62 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm43947-201ENSMUST00000203019 959 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm8959-201ENSMUST00000213150 571 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rd3Q8BRE0 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.25□□□□□ -0.29
Rd3Q8BRE0 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm22334-201ENSMUST00000158070 133 ntBASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm42937-201ENSMUST00000197360 752 ntBASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rd3Q8BRE0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms