Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Mir1938-201ENSMUST00000158746 100 ntBASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sfr1Q8BP27 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sfr1Q8BP27 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Gm16296-201ENSMUST00000159905 325 ntBASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sfr1Q8BP27 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms