Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.3□□□□□ -0.76
Smg1Q8BKX6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm11560-201ENSMUST00000117567 948 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm14921-201ENSMUST00000118643 908 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm13263-201ENSMUST00000121271 838 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm43186-201ENSMUST00000198130 824 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm5599-201ENSMUST00000209602 788 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smg1Q8BKX6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm19931-201ENSMUST00000198920 368 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm11509-201ENSMUST00000117358 325 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smg1Q8BKX6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms