Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm27847-201ENSMUST00000183711 107 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm27375-201ENSMUST00000183799 107 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm27839-201ENSMUST00000184242 106 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm8099-201ENSMUST00000200510 742 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm26185-201ENSMUST00000157692 266 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm4271-201ENSMUST00000174444 973 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm37042-201ENSMUST00000193816 581 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm29705-201ENSMUST00000212598 474 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc40Q8BI79 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm13369-201ENSMUST00000119442 987 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm14704-201ENSMUST00000120300 874 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm27331-201ENSMUST00000183705 60 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc40Q8BI79 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms