Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atg4bQ8BGE6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Mir1247-201ENSMUST00000116706 82 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm9022-201ENSMUST00000182482 992 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atg4bQ8BGE6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm11793-201ENSMUST00000120433 981 ntBASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm9630-201ENSMUST00000178304 885 ntBASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm43118-201ENSMUST00000199149 775 ntBASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gm10478-201ENSMUST00000084451 396 ntBASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atg4bQ8BGE6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms