Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Vma21Q78T54 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Vma21Q78T54 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Vma21Q78T54 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Vma21Q78T54 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Vma21Q78T54 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm10156-201ENSMUST00000122364 462 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm12091-201ENSMUST00000146791 830 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm37042-201ENSMUST00000193816 581 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm7287-201ENSMUST00000205267 602 ntBASIC10.17□□□□□ -0.78
Vma21Q78T54 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Vma21Q78T54 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Vma21Q78T54 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.16□□□□□ -0.78
Vma21Q78T54 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Vma21Q78T54 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.16□□□□□ -0.78
Vma21Q78T54 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm22121-201ENSMUST00000175148 54 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Proscos-202ENSMUST00000178990 666 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Vma21Q78T54 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm8515-201ENSMUST00000194852 576 ntBASIC10.16□□□□□ -0.78
Vma21Q78T54 Gm8598-201ENSMUST00000221184 836 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms