Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.42□□□□□ -0.58
VcanQ62059 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.42□□□□□ -0.58
VcanQ62059 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.42□□□□□ -0.58
VcanQ62059 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.42□□□□□ -0.58
VcanQ62059 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
VcanQ62059 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.42□□□□□ -0.58
VcanQ62059 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
VcanQ62059 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
VcanQ62059 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.42□□□□□ -0.58
VcanQ62059 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
VcanQ62059 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
VcanQ62059 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm23272-201ENSMUST00000104053 129 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm15707-201ENSMUST00000118804 996 ntBASIC11.41□□□□□ -0.58
VcanQ62059 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.41□□□□□ -0.58
VcanQ62059 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VcanQ62059 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
VcanQ62059 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm24279-201ENSMUST00000104236 131 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm10169-201ENSMUST00000121822 348 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.41□□□□□ -0.58
VcanQ62059 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.41□□□□□ -0.58
VcanQ62059 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.41□□□□□ -0.58
VcanQ62059 Gm13624-201ENSMUST00000120263 462 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm24328-201ENSMUST00000175104 67 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm24809-201ENSMUST00000175318 271 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm8343-201ENSMUST00000182705 994 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Gm3726-201ENSMUST00000203110 785 ntBASIC11.41□□□□□ -0.58
VcanQ62059 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VcanQ62059 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Gm17192-201ENSMUST00000169031 511 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
VcanQ62059 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.4□□□□□ -0.58
VcanQ62059 Gm42430-201ENSMUST00000197209 616 ntBASIC11.4□□□□□ -0.58
VcanQ62059 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.4□□□□□ -0.58
VcanQ62059 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.4□□□□□ -0.58
VcanQ62059 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VcanQ62059 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms