Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col11a1Q61245 Gm42433-201ENSMUST00000196806 940 ntBASIC13.71□□□□□ -0.22
Col11a1Q61245 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.22
Col11a1Q61245 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col11a1Q61245 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.71□□□□□ -0.22
Col11a1Q61245 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col11a1Q61245 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.71□□□□□ -0.22
Col11a1Q61245 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col11a1Q61245 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col11a1Q61245 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col11a1Q61245 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.71□□□□□ -0.22
Col11a1Q61245 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.71□□□□□ -0.22
Col11a1Q61245 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm5706-201ENSMUST00000181525 993 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm19587-201ENSMUST00000191395 545 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm18561-201ENSMUST00000206027 804 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm44506-201ENSMUST00000206278 965 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm45113-201ENSMUST00000207518 165 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.7□□□□□ -0.22
Col11a1Q61245 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.7□□□□□ -0.22
Col11a1Q61245 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col11a1Q61245 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm7150-201ENSMUST00000122032 981 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm17070-201ENSMUST00000170463 784 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm5298-201ENSMUST00000201122 892 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm35713-201ENSMUST00000210516 199 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm8894-201ENSMUST00000074642 666 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm12218-201ENSMUST00000117666 399 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm15003-201ENSMUST00000118884 446 ntBASIC13.69□□□□□ -0.22
Col11a1Q61245 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col11a1Q61245 Gm8723-201ENSMUST00000166076 820 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms