Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm13015-201ENSMUST00000118674 204 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Mir7221-201ENSMUST00000184009 72 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm33320-201ENSMUST00000192232 530 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm2756-201ENSMUST00000195851 400 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm43514-201ENSMUST00000198852 424 ntBASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trav3-3Q5R1C3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Gm13517-201ENSMUST00000120782 1495 ntBASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trav3-3Q5R1C3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm24543-201ENSMUST00000103867 82 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm25144-201ENSMUST00000179561 110 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm25352-201ENSMUST00000179815 110 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 AC153872.1-201ENSMUST00000199539 128 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm44771-201ENSMUST00000206975 626 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Dupd1-202ENSMUST00000224735 548 ntBASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trav3-3Q5R1C3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms