Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.22□□□□□ -0.13
Gm28047Q3US59 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm7809-201ENSMUST00000153199 742 ntBASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm5745-201ENSMUST00000183748 313 ntBASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm8602-201ENSMUST00000184045 607 ntBASIC14.22□□□□□ -0.13
Gm28047Q3US59 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm18304-201ENSMUST00000189162 546 ntBASIC14.22□□□□□ -0.13
Gm28047Q3US59 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28047Q3US59 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm8738-201ENSMUST00000172606 329 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm5904-201ENSMUST00000210286 865 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Snora73a-201ENSMUST00000082453 205 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm28047Q3US59 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.21□□□□□ -0.13
Gm28047Q3US59 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Gm28047Q3US59 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm11424-201ENSMUST00000121929 829 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm25261-201ENSMUST00000157416 134 ntBASIC14.2□□□□□ -0.14
Gm28047Q3US59 Gm23119-201ENSMUST00000158610 140 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms