Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm15566-201ENSMUST00000121130 590 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm14760-201ENSMUST00000121831 999 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm15744-201ENSMUST00000161734 213 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col5a2Q3U962 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm9645-201ENSMUST00000197131 792 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm2875-201ENSMUST00000211333 360 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm25201-201ENSMUST00000083093 170 ntBASIC14.67□□□□□ -0.06
Col5a2Q3U962 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col5a2Q3U962 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm11836-201ENSMUST00000121022 441 ntBASIC14.66□□□□□ -0.06
Col5a2Q3U962 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm4654-201ENSMUST00000183305 982 ntBASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.66□□□□□ -0.06
Col5a2Q3U962 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.66□□□□□ -0.06
Col5a2Q3U962 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.66□□□□□ -0.06
Col5a2Q3U962 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col5a2Q3U962 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Gm22877-201ENSMUST00000175451 105 ntBASIC14.65□□□□□ -0.06
Col5a2Q3U962 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Gm7902-201ENSMUST00000198842 947 ntBASIC14.65□□□□□ -0.06
Col5a2Q3U962 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.65□□□□□ -0.06
Col5a2Q3U962 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col5a2Q3U962 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms