Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.89□□□□□ -0.67
Q3U1D9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Gm14832-201ENSMUST00000121289 322 ntBASIC10.89□□□□□ -0.67
Q3U1D9 Gm11597-201ENSMUST00000121423 964 ntBASIC10.89□□□□□ -0.67
Q3U1D9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.89□□□□□ -0.67
Q3U1D9 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.89□□□□□ -0.67
Q3U1D9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.89□□□□□ -0.67
Q3U1D9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.89□□□□□ -0.67
Q3U1D9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.89□□□□□ -0.67
Q3U1D9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Gm39404-201ENSMUST00000216350 313 ntBASIC10.89□□□□□ -0.67
Q3U1D9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Q3U1D9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Q3U1D9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.88□□□□□ -0.67
Q3U1D9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Q3U1D9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.88□□□□□ -0.67
Q3U1D9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Q3U1D9 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.88□□□□□ -0.67
Q3U1D9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.88□□□□□ -0.67
Q3U1D9 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Rprl1-202ENSMUST00000198476 238 ntBASIC10.88□□□□□ -0.67
Q3U1D9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.88□□□□□ -0.67
Q3U1D9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Q3U1D9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.88□□□□□ -0.67
Q3U1D9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Q3U1D9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Q3U1D9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Q3U1D9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Q3U1D9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Q3U1D9 Gm13296-201ENSMUST00000117854 997 ntBASIC10.87□□□□□ -0.67
Q3U1D9 Gm14277-201ENSMUST00000121195 360 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms