Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a2Q07643 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col9a2Q07643 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col9a2Q07643 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col9a2Q07643 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Col9a2Q07643 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Col9a2Q07643 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gm18041-201ENSMUST00000218210 618 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.53□□□□□ -0.24
Col9a2Q07643 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col9a2Q07643 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col9a2Q07643 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col9a2Q07643 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col9a2Q07643 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.52□□□□□ -0.24
Col9a2Q07643 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col9a2Q07643 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Col9a2Q07643 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col9a2Q07643 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.52□□□□□ -0.25
Col9a2Q07643 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.52□□□□□ -0.25
Col9a2Q07643 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.52□□□□□ -0.25
Col9a2Q07643 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.52□□□□□ -0.25
Col9a2Q07643 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.52□□□□□ -0.25
Col9a2Q07643 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.52□□□□□ -0.25
Col9a2Q07643 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.52□□□□□ -0.25
Col9a2Q07643 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col9a2Q07643 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Gm24934-201ENSMUST00000103764 111 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Gm19187-201ENSMUST00000206781 892 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col9a2Q07643 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.51□□□□□ -0.25
Col9a2Q07643 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Col9a2Q07643 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col9a2Q07643 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms