Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.18□□□□□ -0.14
GabpaQ00422 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.18□□□□□ -0.14
GabpaQ00422 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GabpaQ00422 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Gm17040-202ENSMUST00000170597 889 ntBASIC14.18□□□□□ -0.14
GabpaQ00422 Gm44958-201ENSMUST00000203734 736 ntBASIC14.18□□□□□ -0.14
GabpaQ00422 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GabpaQ00422 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.18□□□□□ -0.14
GabpaQ00422 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.18□□□□□ -0.14
GabpaQ00422 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GabpaQ00422 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GabpaQ00422 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GabpaQ00422 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
GabpaQ00422 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Gm24934-201ENSMUST00000103764 111 ntBASIC14.17□□□□□ -0.14
GabpaQ00422 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.17□□□□□ -0.14
GabpaQ00422 Gm12380-201ENSMUST00000119012 544 ntBASIC14.17□□□□□ -0.14
GabpaQ00422 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.17□□□□□ -0.14
GabpaQ00422 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.17□□□□□ -0.14
GabpaQ00422 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Gm18041-201ENSMUST00000218210 618 ntBASIC14.17□□□□□ -0.14
GabpaQ00422 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
GabpaQ00422 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GabpaQ00422 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.17□□□□□ -0.14
GabpaQ00422 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GabpaQ00422 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GabpaQ00422 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.16□□□□□ -0.14
GabpaQ00422 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GabpaQ00422 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GabpaQ00422 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
GabpaQ00422 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Gm37986-201ENSMUST00000193285 383 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 AY036118-201ENSMUST00000200021 923 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 AU022133-201ENSMUST00000200601 873 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GabpaQ00422 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.16□□□□□ -0.14
GabpaQ00422 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GabpaQ00422 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.16□□□□□ -0.14
GabpaQ00422 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GabpaQ00422 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.15□□□□□ -0.14
GabpaQ00422 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GabpaQ00422 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms