Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim43bP86448 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43bP86448 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43bP86448 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43bP86448 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim43bP86448 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm8810-201ENSMUST00000172895 754 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm9630-201ENSMUST00000178304 885 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Gm27331-201ENSMUST00000183705 60 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43bP86448 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.89□□□□□ -0.35
Trim43bP86448 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43bP86448 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim43bP86448 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Gm4271-201ENSMUST00000174444 973 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 Gm27390-201ENSMUST00000184516 176 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 Gm37922-201ENSMUST00000195596 455 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim43bP86448 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 Gm29705-201ENSMUST00000212598 474 ntBASIC12.88□□□□□ -0.35
Trim43bP86448 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim43bP86448 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim43bP86448 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim43bP86448 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43bP86448 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43bP86448 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43bP86448 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms