Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Msx3P70354 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Msx3P70354 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.85□□□□□ -0.35
Msx3P70354 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.85□□□□□ -0.35
Msx3P70354 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.85□□□□□ -0.35
Msx3P70354 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Msx3P70354 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.85□□□□□ -0.35
Msx3P70354 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Msx3P70354 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Msx3P70354 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.85□□□□□ -0.35
Msx3P70354 Gm8227-201ENSMUST00000223306 571 ntBASIC12.85□□□□□ -0.35
Msx3P70354 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Msx3P70354 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Daam2-202ENSMUST00000224595 1926 ntBASIC12.85□□□□□ -0.35
Msx3P70354 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Msx3P70354 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Msx3P70354 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Msx3P70354 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Msx3P70354 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.84□□□□□ -0.35
Msx3P70354 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msx3P70354 Gm13315-201ENSMUST00000120376 991 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Gm11597-201ENSMUST00000121423 964 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.84□□□□□ -0.35
Msx3P70354 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Gm6266-201ENSMUST00000203844 806 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.84□□□□□ -0.35
Msx3P70354 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.84□□□□□ -0.35
Msx3P70354 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Msx3P70354 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Msx3P70354 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Msx3P70354 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.84□□□□□ -0.35
Msx3P70354 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Msx3P70354 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Msx3P70354 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Msx3P70354 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Msx3P70354 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.83□□□□□ -0.36
Msx3P70354 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Msx3P70354 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Msx3P70354 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms