Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Six5P70178 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.73□□□□□ -0.53
Six5P70178 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.73□□□□□ -0.53
Six5P70178 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.73□□□□□ -0.53
Six5P70178 Gm44405-201ENSMUST00000198952 126 ntBASIC11.73□□□□□ -0.53
Six5P70178 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.73□□□□□ -0.53
Six5P70178 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Six5P70178 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six5P70178 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.72□□□□□ -0.53
Six5P70178 Gm12957-201ENSMUST00000117835 377 ntBASIC11.72□□□□□ -0.53
Six5P70178 Gm12314-201ENSMUST00000118104 538 ntBASIC11.72□□□□□ -0.53
Six5P70178 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Gm42627-201ENSMUST00000197347 224 ntBASIC11.72□□□□□ -0.53
Six5P70178 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.72□□□□□ -0.53
Six5P70178 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six5P70178 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Six5P70178 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.71□□□□□ -0.53
Six5P70178 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.71□□□□□ -0.53
Six5P70178 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.71□□□□□ -0.53
Six5P70178 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Six5P70178 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Six5P70178 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.71□□□□□ -0.53
Six5P70178 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.71□□□□□ -0.53
Six5P70178 Gm8062-201ENSMUST00000139696 444 ntBASIC11.71□□□□□ -0.53
Six5P70178 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.71□□□□□ -0.53
Six5P70178 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Six5P70178 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.71□□□□□ -0.53
Six5P70178 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Gm24136-201ENSMUST00000083374 165 ntBASIC11.71□□□□□ -0.53
Six5P70178 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six5P70178 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.71□□□□□ -0.54
Six5P70178 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six5P70178 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six5P70178 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Six5P70178 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms