Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ercc3P49135 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.87□□□□□ -0.03
Ercc3P49135 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.87□□□□□ -0.03
Ercc3P49135 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.87□□□□□ -0.03
Ercc3P49135 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ercc3P49135 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ercc3P49135 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ercc3P49135 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ercc3P49135 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Ercc3P49135 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Ercc3P49135 Gm11531-201ENSMUST00000117614 555 ntBASIC14.86□□□□□ -0.03
Ercc3P49135 Gm13315-201ENSMUST00000120376 991 ntBASIC14.86□□□□□ -0.03
Ercc3P49135 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.86□□□□□ -0.03
Ercc3P49135 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.86□□□□□ -0.03
Ercc3P49135 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Ercc3P49135 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Ercc3P49135 Gm7584-201ENSMUST00000175829 940 ntBASIC14.86□□□□□ -0.03
Ercc3P49135 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.86□□□□□ -0.03
Ercc3P49135 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.86□□□□□ -0.03
Ercc3P49135 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.86□□□□□ -0.03
Ercc3P49135 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ercc3P49135 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ercc3P49135 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ercc3P49135 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.85□□□□□ -0.03
Ercc3P49135 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ercc3P49135 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Mir1247-201ENSMUST00000116706 82 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 Gm12241-201ENSMUST00000118330 726 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.85□□□□□ -0.03
Ercc3P49135 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ercc3P49135 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Gm43758-201ENSMUST00000199500 367 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 Gm43822-201ENSMUST00000200285 476 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 Gm39404-201ENSMUST00000216350 313 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ercc3P49135 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.85□□□□□ -0.03
Ercc3P49135 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.85□□□□□ -0.03
Ercc3P49135 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ercc3P49135 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ercc3P49135 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc3P49135 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc3P49135 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ercc3P49135 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ercc3P49135 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms