Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
HTTP42858 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.04■□□□□ 0.32
HTTP42858 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HTTP42858 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.03■□□□□ 0.32
HTTP42858 RPL8P2-201ENST00000430538 502 ntBASIC17.03■□□□□ 0.32
HTTP42858 FAM58BP-201ENST00000439056 645 ntBASIC17.03■□□□□ 0.32
HTTP42858 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.03■□□□□ 0.32
HTTP42858 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HTTP42858 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 BRI3P1-201ENST00000440440 378 ntBASIC17.03■□□□□ 0.32
HTTP42858 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.03■□□□□ 0.32
HTTP42858 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HTTP42858 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
HTTP42858 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.03■□□□□ 0.32
HTTP42858 AL627422.1-201ENST00000434104 580 ntBASIC17.03■□□□□ 0.32
HTTP42858 AC008723.1-201ENST00000506922 207 ntBASIC17.03■□□□□ 0.32
HTTP42858 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HTTP42858 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
HTTP42858 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 AC144522.1-201ENST00000625111 1658 ntBASIC17.02■□□□□ 0.32
HTTP42858 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.02■□□□□ 0.32
HTTP42858 DUX4L46-201ENST00000566845 751 ntBASIC17.02■□□□□ 0.32
HTTP42858 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HTTP42858 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 FAM90A2P-201ENST00000511144 1395 ntBASIC17.02■□□□□ 0.32
HTTP42858 FAM90A25P-201ENST00000528404 1395 ntBASIC17.02■□□□□ 0.32
HTTP42858 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HTTP42858 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.02■□□□□ 0.31
HTTP42858 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.02■□□□□ 0.31
HTTP42858 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HTTP42858 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HTTP42858 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.01■□□□□ 0.31
HTTP42858 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 MME-218ENST00000625667 363 ntTSL 5 BASIC17.01■□□□□ 0.31
HTTP42858 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HTTP42858 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HTTP42858 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.01■□□□□ 0.31
HTTP42858 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.01■□□□□ 0.31
HTTP42858 AL603764.1-201ENST00000636452 321 ntBASIC17.01■□□□□ 0.31
HTTP42858 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HTTP42858 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 FKBP4P6-201ENST00000457486 1332 ntBASIC17.01■□□□□ 0.31
HTTP42858 AC092127.1-201ENST00000567093 3455 ntBASIC17.01■□□□□ 0.31
HTTP42858 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.01■□□□□ 0.31
HTTP42858 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HTTP42858 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms