Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.16□□□□□ -0.46
Hoxc11P31313 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.16□□□□□ -0.46
Hoxc11P31313 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxc11P31313 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxc11P31313 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Hoxc11P31313 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm16570-201ENSMUST00000161951 436 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm2546-201ENSMUST00000182630 991 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Hoxc11P31313 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Mir433-201ENSMUST00000093564 124 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxc11P31313 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.15□□□□□ -0.46
Hoxc11P31313 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxc11P31313 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc11P31313 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc11P31313 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.15□□□□□ -0.47
Hoxc11P31313 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc11P31313 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc11P31313 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxc11P31313 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Daam2-202ENSMUST00000224595 1926 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxc11P31313 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm11531-201ENSMUST00000117614 555 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxc11P31313 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms