Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp3P28862 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mmp3P28862 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp3P28862 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.38□□□□□ -0.27
Mmp3P28862 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Mmp3P28862 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mmp3P28862 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Mmp3P28862 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm11989-201ENSMUST00000117240 672 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 Gm11362-201ENSMUST00000118838 850 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.37□□□□□ -0.27
Mmp3P28862 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.37□□□□□ -0.27
Mmp3P28862 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm27552-201ENSMUST00000183351 62 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 Gm27844-201ENSMUST00000183613 62 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 Gm27627-201ENSMUST00000183644 150 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Mmp3P28862 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.37□□□□□ -0.27
Mmp3P28862 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.37□□□□□ -0.27
Mmp3P28862 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp3P28862 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mmp3P28862 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Mmp3P28862 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Mmp3P28862 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mmp3P28862 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Gm12380-201ENSMUST00000119012 544 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.36□□□□□ -0.27
Mmp3P28862 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.36□□□□□ -0.27
Mmp3P28862 AY036118-201ENSMUST00000200021 923 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.36□□□□□ -0.27
Mmp3P28862 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Mmp3P28862 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mmp3P28862 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mmp3P28862 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mmp3P28862 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms