Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cbx3P23198 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Cbx3P23198 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cbx3P23198 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cbx3P23198 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cbx3P23198 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cbx3P23198 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.39□□□□□ -0.59
Cbx3P23198 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Cbx3P23198 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Gm11594-201ENSMUST00000122313 162 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.39□□□□□ -0.59
Cbx3P23198 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Gm27525-201ENSMUST00000184465 107 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 Gm27390-201ENSMUST00000184516 176 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 Gm44335-201ENSMUST00000196879 141 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 Gm44297-201ENSMUST00000198304 141 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 Gm44346-201ENSMUST00000198851 141 ntBASIC11.39□□□□□ -0.59
Cbx3P23198 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Cbx3P23198 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.39□□□□□ -0.59
Cbx3P23198 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Cbx3P23198 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cbx3P23198 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Gm5566-201ENSMUST00000116118 459 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.38□□□□□ -0.59
Cbx3P23198 Gm14822-201ENSMUST00000122247 291 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Gm25911-201ENSMUST00000157621 56 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Gm7774-201ENSMUST00000200064 533 ntBASIC11.38□□□□□ -0.59
Cbx3P23198 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cbx3P23198 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cbx3P23198 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cbx3P23198 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms