Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fv4P11370 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fv4P11370 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.08□□□□□ -0.48
Fv4P11370 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.08□□□□□ -0.48
Fv4P11370 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.08□□□□□ -0.48
Fv4P11370 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fv4P11370 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Fv4P11370 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Gm42599-201ENSMUST00000201308 469 ntBASIC12.08□□□□□ -0.48
Fv4P11370 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.08□□□□□ -0.48
Fv4P11370 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.08□□□□□ -0.48
Fv4P11370 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fv4P11370 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fv4P11370 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.08□□□□□ -0.48
Fv4P11370 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fv4P11370 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fv4P11370 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.07□□□□□ -0.48
Fv4P11370 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fv4P11370 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Gm16177-201ENSMUST00000120728 718 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Gm9022-201ENSMUST00000182482 992 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Gm27682-201ENSMUST00000183930 110 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Gm27243-201ENSMUST00000183964 521 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fv4P11370 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fv4P11370 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.07□□□□□ -0.48
Fv4P11370 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.07□□□□□ -0.48
Fv4P11370 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Fv4P11370 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.07□□□□□ -0.48
Fv4P11370 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fv4P11370 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fv4P11370 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Fv4P11370 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Fv4P11370 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.06□□□□□ -0.48
Fv4P11370 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.06□□□□□ -0.48
Fv4P11370 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Gm8018-201ENSMUST00000173536 789 ntBASIC12.06□□□□□ -0.48
Fv4P11370 Gm29127-201ENSMUST00000188304 517 ntBASIC12.06□□□□□ -0.48
Fv4P11370 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.06□□□□□ -0.48
Fv4P11370 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.06□□□□□ -0.48
Fv4P11370 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.06□□□□□ -0.48
Fv4P11370 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fv4P11370 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms