Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Ccl3P10855 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccl3P10855 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Ccl3P10855 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Ccl3P10855 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ccl3P10855 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Gm7851-201ENSMUST00000117574 323 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Gm12208-201ENSMUST00000122004 163 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.02□□□□□ -0.65
Ccl3P10855 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Gm4482-201ENSMUST00000200876 742 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.02□□□□□ -0.65
Ccl3P10855 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.02□□□□□ -0.65
Ccl3P10855 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Ccl3P10855 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Ccl3P10855 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl3P10855 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccl3P10855 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccl3P10855 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Ccl3P10855 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccl3P10855 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Gm11667-201ENSMUST00000119828 486 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ccl3P10855 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ccl3P10855 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccl3P10855 Gm43184-201ENSMUST00000197247 542 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Gm8285-201ENSMUST00000208293 759 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Gm44551-201ENSMUST00000208804 171 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
Ccl3P10855 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Gm807-202ENSMUST00000224929 408 ntBASIC11.01□□□□□ -0.65
Ccl3P10855 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccl3P10855 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccl3P10855 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl3P10855 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl3P10855 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl3P10855 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Gm44999-201ENSMUST00000207456 1493 ntBASIC11□□□□□ -0.65
Ccl3P10855 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms