Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NclP09405 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NclP09405 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NclP09405 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NclP09405 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
NclP09405 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
NclP09405 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.56■□□□□ 0.56
NclP09405 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Gm14028-201ENSMUST00000117434 479 ntBASIC18.56■□□□□ 0.56
NclP09405 Gm13296-201ENSMUST00000117854 997 ntBASIC18.56■□□□□ 0.56
NclP09405 Gm13323-201ENSMUST00000120245 1151 ntBASIC18.56■□□□□ 0.56
NclP09405 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NclP09405 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC18.56■□□□□ 0.56
NclP09405 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC18.56■□□□□ 0.56
NclP09405 Gm10371-202ENSMUST00000228010 1081 ntBASIC18.56■□□□□ 0.56
NclP09405 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NclP09405 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NclP09405 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NclP09405 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NclP09405 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Rubie-203ENSMUST00000227803 2430 ntBASIC18.55■□□□□ 0.56
NclP09405 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Gm45643-201ENSMUST00000211364 1484 ntBASIC18.55■□□□□ 0.56
NclP09405 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Gm13996-201ENSMUST00000118456 430 ntBASIC18.55■□□□□ 0.56
NclP09405 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Gm18304-201ENSMUST00000189162 546 ntBASIC18.55■□□□□ 0.56
NclP09405 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC18.55■□□□□ 0.56
NclP09405 AC155637.1-201ENSMUST00000218560 636 ntBASIC18.55■□□□□ 0.56
NclP09405 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NclP09405 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Ssr1-203ENSMUST00000225246 1825 ntBASIC18.55■□□□□ 0.56
NclP09405 Retreg1-206ENSMUST00000228306 1430 ntBASIC18.55■□□□□ 0.56
NclP09405 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NclP09405 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NclP09405 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NclP09405 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
NclP09405 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC18.54■□□□□ 0.56
NclP09405 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NclP09405 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.54■□□□□ 0.56
NclP09405 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.54■□□□□ 0.56
NclP09405 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms