Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxb3P09026 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.59□□□□□ -0.39
Hoxb3P09026 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxb3P09026 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.59□□□□□ -0.39
Hoxb3P09026 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC12.58□□□□□ -0.4
Hoxb3P09026 AC132433.1-201ENSMUST00000221553 1101 ntBASIC12.58□□□□□ -0.4
Hoxb3P09026 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.58□□□□□ -0.4
Hoxb3P09026 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Hoxb3P09026 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxb3P09026 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Mir1901-201ENSMUST00000122616 78 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm18734-201ENSMUST00000172937 808 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Hoxb3P09026 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm44554-201ENSMUST00000208738 147 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 CT010480.1-201ENSMUST00000223612 363 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm10076-201ENSMUST00000073238 384 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxb3P09026 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxb3P09026 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.57□□□□□ -0.4
Hoxb3P09026 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxb3P09026 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb3P09026 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb3P09026 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb3P09026 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb3P09026 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxb3P09026 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.56□□□□□ -0.4
Hoxb3P09026 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.56□□□□□ -0.4
Hoxb3P09026 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxb3P09026 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms