Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.02□□□□□ -0.32
Ttc3O88196 Gm18038-201ENSMUST00000197900 485 ntBASIC13.02□□□□□ -0.32
Ttc3O88196 Gm44100-201ENSMUST00000204329 436 ntBASIC13.02□□□□□ -0.32
Ttc3O88196 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.02□□□□□ -0.32
Ttc3O88196 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ttc3O88196 Ntng1-201ENSMUST00000051253 327 ntBASIC13.02□□□□□ -0.32
Ttc3O88196 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ttc3O88196 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.02□□□□□ -0.33
Ttc3O88196 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ttc3O88196 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ttc3O88196 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.02□□□□□ -0.33
Ttc3O88196 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.02□□□□□ -0.33
Ttc3O88196 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.02□□□□□ -0.33
Ttc3O88196 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.02□□□□□ -0.33
Ttc3O88196 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ttc3O88196 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm11511-201ENSMUST00000118146 540 ntBASIC13.01□□□□□ -0.33
Ttc3O88196 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.01□□□□□ -0.33
Ttc3O88196 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.01□□□□□ -0.33
Ttc3O88196 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm11450-201ENSMUST00000121144 333 ntBASIC13.01□□□□□ -0.33
Ttc3O88196 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Spcs1-203ENSMUST00000226374 592 ntBASIC13.01□□□□□ -0.33
Ttc3O88196 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.01□□□□□ -0.33
Ttc3O88196 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ttc3O88196 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ttc3O88196 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ttc3O88196 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Gm12857-201ENSMUST00000117678 592 ntBASIC13□□□□□ -0.33
Ttc3O88196 Gm25881-201ENSMUST00000157783 103 ntBASIC13□□□□□ -0.33
Ttc3O88196 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ttc3O88196 CT009718.3-201ENSMUST00000221116 367 ntBASIC13□□□□□ -0.33
Ttc3O88196 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13□□□□□ -0.33
Ttc3O88196 AC133602.1-201ENSMUST00000227510 509 ntBASIC13□□□□□ -0.33
Ttc3O88196 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ttc3O88196 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ttc3O88196 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ttc3O88196 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms