Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gfi1bO70237 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gfi1bO70237 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gfi1bO70237 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.47□□□□□ -0.73
Gfi1bO70237 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gfi1bO70237 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Gfi1bO70237 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.46□□□□□ -0.73
Gfi1bO70237 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Gfi1bO70237 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.46□□□□□ -0.73
Gfi1bO70237 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.46□□□□□ -0.73
Gfi1bO70237 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Gfi1bO70237 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.46□□□□□ -0.73
Gfi1bO70237 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.46□□□□□ -0.73
Gfi1bO70237 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Gm15823-201ENSMUST00000064305 670 ntBASIC10.46□□□□□ -0.73
Gfi1bO70237 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gfi1bO70237 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Gfi1bO70237 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.46□□□□□ -0.74
Gfi1bO70237 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.46□□□□□ -0.74
Gfi1bO70237 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.46□□□□□ -0.74
Gfi1bO70237 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.46□□□□□ -0.74
Gfi1bO70237 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Gfi1bO70237 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gfi1bO70237 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm43094-201ENSMUST00000196549 921 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm19078-201ENSMUST00000206311 727 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.45□□□□□ -0.74
Gfi1bO70237 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.45□□□□□ -0.74
Gfi1bO70237 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gfi1bO70237 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms